| 1 |  Joaquim Rodríguez Oliver (ESP) | Katusha | 4:52:40 |
| 2 |  Michel Kreder (P-B) | Garmin - Transitions | 0:00:08 |
| 3 |  Alexandr Kolobnev (RUS) | Katusha | 0:00:10 |
| 4 | Ruben Perez Moreno (ESP) | Euskaltel - Euskadi | 0:00:12 |
| 5 | Beñat Intxausti Elorriaga (ESP) | Euskaltel - Euskadi | 0:00:14 |
| 6 |  Mauro Finetto (ITA) | Liquigas - Doimo | mt |
| 7 |  Maxime Bouet (FRA) | AG2R - La Mondiale | mt |
| 8 | Juan Jose Oroz Ugalde (ESP) | Euskaltel - Euskadi | mt |
| 9 | Valerio Agnoli (ITA) | Liquigas - Doimo | 0:00:18 |
| 10 | Ángel Vicioso Arcos (ESP) | Andalucía - Cajasur | 0:00:19 |
| 11 | Arkaitz Duran Aroca (ESP) | Footon - Servetto | mt |
| 12 | Iban Velasco Murillo (ESP) | Euskaltel - Euskadi | mt |
| 13 | Amets Txurruka Ansola (ESP) | Euskaltel - Euskadi | mt |
| 14 |  Kristijan Koren (SLO) | Liquigas - Doimo | mt |
| 15 |  René Mandri (EST) | AG2R - La Mondiale | mt |
| 16 | José Alberto Benitez Roman (ESP) | Footon - Servetto | mt |
| 17 | Egoi Martinez De Esteban (ESP) | Euskaltel - Euskadi | mt |
| 18 | Aitor Perez Arrieta (ESP) | Footon - Servetto | mt |
| 19 |  Peter Stetina (E-U) | Garmin - Transitions | mt |
| 20 | Gustavo César Veloso (ESP) | Xacobeo - Galicia | 0:00:24 |
| 21 | José Herrada Lopez (ESP) | Caja Rural | 0:00:25 |
| 22 |  Christian Meier (CAN) | Garmin - Transitions | mt |
| 23 | Guillaume Bonnafond (FRA) | AG2R - La Mondiale | 0:00:28 |
| 24 | Gustavo Dominguez Lemos (ESP) | Xacobeo - Galicia | mt |
| 25 |  Christian Knees (ALL) | Team Milram | 0:00:31 |
| 26 | Manuel Vazquez Hueso (ESP) | Andalucía - Cajasur | 0:00:32 |
| 27 | Javier Moreno Bazan (ESP) | Andalucía - Cajasur | mt |
| 28 | Dominique Nerz (ALL) | Team Milram | mt |
| 29 | Marcos Garcia Fernandez (ESP) | Xacobeo - Galicia | mt |
| 30 | Vladimir Efimkin (RUS) | AG2R - La Mondiale | 0:00:37 |
| 31 |  Vitor Rodrigues (POR) | Caja Rural | mt |
| 32 | Mikel Landa Meana (ESP) | Orbea | 0:00:40 |
| 33 |  Gregory Brenes Obando (CRC) | Burgos 2016 - Castilla y Leon | mt |
| 34 |  Brian Vandborg (DAN) | Liquigas - Doimo | 0:00:42 |
| 35 |  Vasil Kiryienka (BLR) | Caisse d'Epargne | 0:00:48 |
| 36 | Johannes Fröhlinger (ALL) | Team Milram | mt |
| 37 | Eduard Vorganov (RUS) | Katusha | mt |
| 38 | José Ángel Gómez Marchante (ESP) | Andalucía - Cajasur | mt |
| 39 | Igor Antón Hernandez (ESP) | Euskaltel - Euskadi | 0:00:53 |
| 40 | Rubén Plaza Molina (ESP) | Caisse d'Epargne | 0:00:55 |
| 41 |  Rigoberto Uran Uran (COL) | Caisse d'Epargne | 0:00:56 |
| 42 | Alan Perez Lezaun (ESP) | Euskaltel - Euskadi | 0:01:00 |
| 43 |  Fabricio Ferrari Barcelo (URU) | Caja Rural | 0:01:07 |
| 44 | Egoitz Garcia Echeguibel (ESP) | Caja Rural | mt |
| 45 | Mikel Nieve Iturralde (ESP) | Euskaltel - Euskadi | mt |
| 46 | Alexandre Botcharov (RUS) | Katusha | mt |
| 47 | Ivan Santaromita (ITA) | Liquigas - Doimo | mt |
| 48 | Vladimir Karpets (RUS) | Katusha | 0:01:37 |
| 49 | David Arroyo Duran (ESP) | Caisse d'Epargne | mt |
| 50 | Giampaolo Cheula (ITA) | Footon - Servetto | mt |
| 51 | Xabier Zandio Echaide (ESP) | Caisse d'Epargne | 0:01:57 |
| 52 | Aketza Pena Iza (ESP) | Caja Rural | 0:02:30 |
| 53 | Pedro Merino Criado (ESP) | Footon - Servetto | 0:04:21 |
| 54 | Angel Madrazo Ruiz (ESP) | Caisse d'Epargne | mt |
| 55 | Francesco Bellotti (ITA) | Liquigas - Doimo | mt |
| 56 |  Markus Eibegger (AUT) | Footon - Servetto | mt |
| 57 | Marco Corti (ITA) | Footon - Servetto | 0:04:51 |
| 58 | Blel Kadri (FRA) | AG2R - La Mondiale | mt |
| 59 | Evgeni Petrov (RUS) | Katusha | mt |
| 60 | Thomas Rohregger (AUT) | Team Milram | mt |
| 61 | David García Da Pena (ESP) | Xacobeo - Galicia | mt |
| 62 | Serguei Klimov (RUS) | Katusha | mt |
| 63 | Juan Mauricio Soler Hernandez (COL) | Caisse d'Epargne | mt |
| 64 | Timothy Duggan (E-U) | Garmin - Transitions | mt |
| 65 | Luca Mazzanti (ITA) | Katusha | mt |
| 66 | Matthias Russ (ALL) | Team Milram | mt |
| 67 | Alessandro Vanotti (ITA) | Liquigas - Doimo | 0:05:03 |
| 68 | Iban Mayoz Etxebarria (ESP) | Footon - Servetto | 0:06:13 |
| 69 | Ion Izagirre Insausti (ESP) | Orbea | 0:06:28 |
| 70 | Diego Gallego Arnaiz (ESP) | Burgos 2016 - Castilla y Leon | mt |
| 71 | Jorge Azanza Soto (ESP) | Euskaltel - Euskadi | 0:09:48 |
| 72 | Andres Avelino Antuña Coro (ESP) | Burgos 2016 - Castilla y Leon | mt |
| 73 | Javier Ramirez Abeja (ESP) | Andalucía - Cajasur | mt |
| 74 | Raul Santamarta Valvuena (ESP) | Burgos 2016 - Castilla y Leon | mt |
| 75 | Gustavo Rodriguez Iglesias (ESP) | Xacobeo - Galicia | mt |
| 76 | David De La Cruz Melgarejo (ESP) | Caja Rural | 0:09:53 |
| 77 | Manuel Calvente Gorbas (ESP) | Andalucía - Cajasur | 0:09:56 |
| 78 | Antonio Piedra Perez (ESP) | Andalucía - Cajasur | mt |
| 79 | Alberto Fernandez Sainz (ESP) | Xacobeo - Galicia | mt |
| 80 |  Oleg Chuzhda (UKR) | Caja Rural | mt |
| 81 |  Trent Lowe (AUS) | Garmin - Transitions | mt |
| 82 | Iván Melero Coco (ESP) | Burgos 2016 - Castilla y Leon | 0:11:31 |
| 83 | Sergio Carrasco Garcia (ESP) | Andalucía - Cajasur | 0:12:29 |
| 84 | Vladimir Isaychev (RUS) | Xacobeo - Galicia | 0:13:04 |
| 85 | Andoni Blazquez Berasarte (ESP) | Orbea | 0:13:29 |
| 86 | Pablo Lechuga Rodriguez (ESP) | Andalucía - Cajasur | mt |
| 87 | Adrian Saez De Arregi Egurrola (ESP) | Orbea | mt |
| 88 | Ricardo Garcia Ambroa (ESP) | Orbea | mt |
